Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015863546.1_cds_XP_016515706.1_28026
CDS Infomation

[gene=LOC107832379] [db_xref=GeneID:107832379] [protein=G-type lectin S-receptor-like serine/threonine-protein kinase RKS1] [protein_id=XP_016515706.1] [location=join(25540..26830,26909..27037,27892..28091,28202..28412,28509..28746,28848..28995,29860..30168)] [gbkey=CDS]
Sequence

ATGTCCCAAAAGAAAGAGTTCTTGATAATACTAATAGTATTTATCTTAGTTCTTGTCCCA
TTCTGTACTTCCACTGATTCTATTTCCTTCAACCAGTCTTTAAAAGATGGAGATTTGTTA
ATCTCTTCTAAGAAATCTTTTGCTCTTGGTTTCTTCAGCCCTGGAAATTCCAACAAAAGA
TATATTGGAATTTGGTACAATAATGTCCCTGAACAAACTGTTGTTTGGGTTGCAAACAGA
GACAATCCCATCAATAGCACATCTGGGATTCTCAGTATTAATCCCACAGGAAATCTTGAC
ATACTTGACAAAAAAATCAAAATTTTGGCCTGGAAAACCAATATTTCTTCAGCTACTATG
AGAGGAAACTCCTACTCTGCTCAGCTTTTGGATTCAGGGAATTTTGTGTTGTTTCAAGAC
TCAAAAAGGGAAGTTATTGTATGGCAAAGCTTTGATTATCCTACAAATACTATACTTCCA
AACATGAAATATGGGAATGACAAGAAAACCGGTTTGATCCGGTCTCTAACATCTTGGAAG
TCGATGGAAGACCCCGGTTCAGGTGAGTATGTGTACAAGATTGAGATAAATGGTACAGTA
CCACAAGTTTTCCTGTACAAGAATTCTAACAGGATATGGCGAACCGGACCCTGGACTGGT
CTTGGCTGGAGTGGTGTACCAGAAATGAAACCTGGATATATTTTCAGTATCAACTATGTT
GATAATGATAGTGAGGTCAGTGTAACATTCAGTATGCGCGACTCTGCAATCTCAAGATTA
GTATTAAATGAATCAGGGATGATGAATATATTGAACTGGCAAGAAAGTGCTCAGAAATGG
GTTCAATTTTGGTACGCACCTAAGGACCCGTGTGATAACTATGTACATTGTGGCAAAAAT
AGTAATTGCAACTTGTACAATTTGGCTGAATTTGAATGTAGTTGTCTTCTTGGGTACGAG
CCAAGGGATAATCGGTCATGGTACCTGAGAGACGGTTCCCATGGGTGTTTGAGAAAGAAA
GACGAAAACGTTTGCAAAAATGGCAAGGGGTTTGCAAAATTGACCAATGTGAAAATCCCG
GATACATACACTGCTATTTTAAACAAGAGTATGGGATTGCAAGAATGTGAGCAATTATGT
CTGAATAATTGTTCTTGCACTGCTTACGCGAGTGCTAATGTTAGTGTAGGAGGAATTGGA
TGCATTACTTGGTATGGTGACTTAATAGATACAAGGGAGTTTACAGATGGTGGCCAAGAT
TTCTATATCCGAGTATCTGCATCTACTTTGGCTCAATTCTTGGAGAAATCAAATGGCTAT
CACAGGAAAAGAACTATAGTGATTGTAACAGTGTGCATTATTGCAATACTCGTAGCACTC
TCGATTGCTTGTTGTTTGGTAATATGGAAAAAGAGAAAAGATAAAGAGGACCAGTTCACC
AGTTTGATTACTTTGAAAAGGAATTTAGCATCATATGAGAACTCTTCAAGAGGCAATGAG
ATAGATGGAAGTGAACATGTTGATGTGTTAATCTTTGATCTAAACACTATTATTTCAGCC
ACTGATGATTTCTCCGATGCTAATAAACTCGGTGAAGGAGGCTTTGGCAGTGTTTACAAG
GGTCAGCTAAATAATGGACAAGAAATAGCTGTCAAAAGACTTTCAAAAACTTCAGGGCAA
GGAGTTGAGGAATTCAAGAATGAAGTAACGTTAATCGCGAAAGTACAGCACAGAAATCTT
GTGAAGCTTTTAGGATGTTGCATACAAAAAGGAGAGAAGATGTTGGTATATGAATACTTG
CCAAACAAAGGCTTGGACAATTTTATCTTTGATAAAACTAAAGGGTCTCAGTTAGATTGG
AGAAAACGATTTGAAATCATTGTTGGAATTGCACGAGGATTGTCATATCTTCACTACGAT
TCTCGAGTAAGAATCATACATAGGGATCTTAAAGCGAGCAACGTTTTACTAGATGCCTCT
ATGCAGCCAAAAATATCAGATTTCGGAACTGCTAGAATTTTTGGAGGTGATCAAATTGAA
GCAAACACGAATCGAGTTGTTGGAACATATGGTTATATGTCGCCGGAATATGCAATGGAA
GGGCATTTTTCAGTGAAGTCTGATGTTTTCAGTTTTGGAGTTCTGTTGTTGGAGATCATC
ACAGGAAGGAAGAACACTACTCATTATCAAGATCATTCTTTAAATTTAGTTGGAAATGTT
TGGGATTTCTGGAATGATGACAAAGCTATAGAAGTAGTTGATCCCTTATTAGGGGAGTGG
TATGAAACTGGTGAAGTTTTAAGATGCATCCAAATTGGACTATTGTGTGTTCAATCACAT
GCAAATGATAGGCCAATGATGTCTGAAGTAGTGTTTATGCTCTGCAATGAAACAAAACTA
TCTAACCCTGGACAACCTGGTTTTGTATTCAGATCAAGAAATTCTTCTTCACTTCCTTAC
TCATCATCAGCTAGTGTTGGAACATCTGTAAATGATACTTCCATTACTACACACCATGCC
CGTTAA

Peptide Sequence

PEP ID

XP_016515706.1
PEP Infomation

PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Nicotiana tabacum]
Sequence

MSQKKEFLIILIVFILVLVPFCTSTDSISFNQSLKDGDLLISSKKSFALGFFSPGNSNKR
YIGIWYNNVPEQTVVWVANRDNPINSTSGILSINPTGNLDILDKKIKILAWKTNISSATM
RGNSYSAQLLDSGNFVLFQDSKREVIVWQSFDYPTNTILPNMKYGNDKKTGLIRSLTSWK
SMEDPGSGEYVYKIEINGTVPQVFLYKNSNRIWRTGPWTGLGWSGVPEMKPGYIFSINYV
DNDSEVSVTFSMRDSAISRLVLNESGMMNILNWQESAQKWVQFWYAPKDPCDNYVHCGKN
SNCNLYNLAEFECSCLLGYEPRDNRSWYLRDGSHGCLRKKDENVCKNGKGFAKLTNVKIP
DTYTAILNKSMGLQECEQLCLNNCSCTAYASANVSVGGIGCITWYGDLIDTREFTDGGQD
FYIRVSASTLAQFLEKSNGYHRKRTIVIVTVCIIAILVALSIACCLVIWKKRKDKEDQFT
SLITLKRNLASYENSSRGNEIDGSEHVDVLIFDLNTIISATDDFSDANKLGEGGFGSVYK
GQLNNGQEIAVKRLSKTSGQGVEEFKNEVTLIAKVQHRNLVKLLGCCIQKGEKMLVYEYL
PNKGLDNFIFDKTKGSQLDWRKRFEIIVGIARGLSYLHYDSRVRIIHRDLKASNVLLDAS
MQPKISDFGTARIFGGDQIEANTNRVVGTYGYMSPEYAMEGHFSVKSDVFSFGVLLLEII
TGRKNTTHYQDHSLNLVGNVWDFWNDDKAIEVVDPLLGEWYETGEVLRCIQIGLLCVQSH
ANDRPMMSEVVFMLCNETKLSNPGQPGFVFRSRNSSSLPYSSSASVGTSVNDTSITTHHA
R

Transcript Sequence

Gene sequence data has not been registered.